PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID augustus_masked-scaffold02792-abinit-gene-0.6-mRNA-1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Castanea
Family ERF
Protein Properties Length: 211aa    MW: 22345.5 Da    PI: 4.5684
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
augustus_masked-scaffold02792-abinit-gene-0.6-mRNA-1genomeTHGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.84.7e-1753101356
                                                   AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                                           y+G+r  k++g+Wv+eIr+p++   ++r++lg++ ++e+Aa+a++aa+++l+g+
  augustus_masked-scaffold02792-abinit-gene-0.6-mRNA-1  53 YRGIR--KRSGKWVSEIREPRK---TTRIWLGTYSSPEMAAAAYDAAALALKGH 101
                                                           99**6..678*********843...5*************************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541716.54E-1851109IPR016177DNA-binding domain
CDDcd000182.29E-1551110No hitNo description
PROSITE profilePS5103220.07352108IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-2652110IPR001471AP2/ERF domain
SMARTSM003802.3E-2752114IPR001471AP2/ERF domain
PfamPF008472.0E-1053101IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MASNYNPSDV PQNPNDTPTP TPTPDADATS PRLAQSPGGS LGQPVLSGRH SMYRGIRKRS  60
GKWVSEIREP RKTTRIWLGT YSSPEMAAAA YDAAALALKG HDTALNFPNS RLTYPIPASA  120
SASDIRAAAA SAAEAARVRT ESESSSGGGA QTNVETASRV EDEFIDEEEL LNMPNLLVDM  180
AEGMLMSPPR IESKSSSDES GGGGDNLWSY T
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010662529.18e-65PREDICTED: ethylene-responsive transcription factor ERF027
SwissprotQ9FJ904e-51ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLF6HP689e-65F6HP68_VITVI; Putative uncharacterized protein
STRINGVIT_16s0100g00400.t012e-64(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.13e-36ERF family protein